Fixes#299.
* configure.ac, doc/Makefile.am: Adjust.
* NEWS, HACKING, README: Document the change.
* doc/dot.in: Delete, not used anymore.
* doc/Doxyfile.in: Adjust to not look for dot.
* debian/rules: Use --enable-doxygen.
* NEWS: Mention the change.
* src/: Rename as ...
* spot/: ... this, adjust all headers to include <spot/...> instead of
"...", and adjust all Makefile.am to search headers from the top-level
directory.
* HACKING: Add conventions about #include.
* spot/sanity/style.test: Add a few more grep to catch cases
that do not follow these conventions.
* .gitignore, Makefile.am, README, bench/stutter/Makefile.am,
bench/stutter/stutter_invariance_formulas.cc,
bench/stutter/stutter_invariance_randomgraph.cc, configure.ac,
debian/rules, doc/Doxyfile.in, doc/Makefile.am,
doc/org/.dir-locals.el.in, doc/org/g++wrap.in, doc/org/init.el.in,
doc/org/tut01.org, doc/org/tut02.org, doc/org/tut03.org,
doc/org/tut10.org, doc/org/tut20.org, doc/org/tut21.org,
doc/org/tut22.org, doc/org/tut30.org, iface/ltsmin/Makefile.am,
iface/ltsmin/kripke.test, iface/ltsmin/ltsmin.cc,
iface/ltsmin/ltsmin.hh, iface/ltsmin/modelcheck.cc,
wrap/python/Makefile.am, wrap/python/ajax/spotcgi.in,
wrap/python/spot_impl.i, wrap/python/tests/ltl2tgba.py,
wrap/python/tests/randgen.py, wrap/python/tests/run.in: Adjust.
* configure.ac: Check for ipython.
* wrap/python/tests/Makefile.am (nb-html): New rule, using ipython.
* debian/control: Depend on ipython.
* debian/rules: Run nb-html.
* debian/python3-spot.examples: Install the genrated html files.
* debian/control (libspot-dev): Do not depend on an exact version of
spot.
(spot-doc): depend on libjs-mathjax.
* debian/rules: Patch doc/userdoc/ to use the local version of MathJax.
This work around what appears to be an exception handling bug, causing
binaries to not always catch excepting thrown by the library.
* debian/rules: Here.
